Updating specs: - nextstrain-base Package Version Build Channel Size ───────────────────────────────────────────────────────────────────────────────────────────────────── Install: ───────────────────────────────────────────────────────────────────────────────────────────────────── + libhwloc 2.8.0 h32351e8_1 conda-forge/linux-64 3MB + ncbi-datasets-cli 14.6.0 ha770c72_0 conda-forge/linux-64 12MB + platformdirs 2.5.2 pyhd8ed1ab_1 conda-forge/noarch 16kB + pyfastx 0.8.4 py310h8472f5a_1 bioconda/linux-64 76kB Change: ───────────────────────────────────────────────────────────────────────────────────────────────────── - backports 1.0 py_2 conda-forge 4kB + backports 1.0 pyhd8ed1ab_3 conda-forge/noarch 6kB - fftw 3.3.10 nompi_hf0379b8_105 conda-forge 2MB + fftw 3.3.10 nompi_hf0379b8_106 conda-forge/linux-64 2MB - freetype 2.12.1 hca18f0e_0 conda-forge 905kB + freetype 2.12.1 hca18f0e_1 conda-forge/linux-64 626kB - ld_impl_linux-64 2.39 hc81fddc_0 conda-forge 778kB + ld_impl_linux-64 2.39 hcc3a1bd_1 conda-forge/linux-64 691kB - openssl 3.0.7 h166bdaf_0 conda-forge 3MB + openssl 3.0.7 h0b41bf4_1 conda-forge/linux-64 3MB - python_abi 3.10 2_cp310 conda-forge 4kB + python_abi 3.10 3_cp310 conda-forge/linux-64 6kB - re2 2022.06.01 h27087fc_0 conda-forge 220kB + re2 2022.06.01 h27087fc_1 conda-forge/linux-64 196kB - zstandard 0.19.0 py310h5764c6d_0 conda-forge 671kB + zstandard 0.19.0 py310hdeb6495_1 conda-forge/linux-64 382kB Upgrade: ───────────────────────────────────────────────────────────────────────────────────────────────────── - augur 18.1.2 pyhdfd78af_0 bioconda 167kB + augur 18.2.0 pyhdfd78af_0 bioconda/noarch 175kB - awscli 1.27.5 py310hff52083_0 conda-forge 2MB + awscli 1.27.24 py310hff52083_0 conda-forge/linux-64 2MB - biopython 1.79 py310h5764c6d_3 conda-forge 3MB + biopython 1.80 py310h5764c6d_0 conda-forge/linux-64 3MB - boto3 1.26.5 pyhd8ed1ab_0 conda-forge 74kB + boto3 1.26.24 pyhd8ed1ab_0 conda-forge/noarch 77kB - botocore 1.29.5 pyhd8ed1ab_0 conda-forge 6MB + botocore 1.29.24 pyhd8ed1ab_0 conda-forge/noarch 6MB - ca-certificates 2022.9.24 ha878542_0 conda-forge 154kB + ca-certificates 2022.12.7 ha878542_0 conda-forge/linux-64 146kB - certifi 2022.9.24 pyhd8ed1ab_0 conda-forge 159kB + certifi 2022.12.7 pyhd8ed1ab_0 conda-forge/noarch 151kB - cryptography 38.0.3 py310h600f1e7_0 conda-forge 2MB + cryptography 38.0.4 py310h600f1e7_0 conda-forge/linux-64 1MB - dropbox 11.35.0 pyhd8ed1ab_0 conda-forge 961kB + dropbox 11.36.0 pyhd8ed1ab_0 conda-forge/noarch 965kB - fsspec 2022.10.0 pyhd8ed1ab_0 conda-forge 98kB + fsspec 2022.11.0 pyhd8ed1ab_0 conda-forge/noarch 98kB - gitdb 4.0.9 pyhd8ed1ab_0 conda-forge 48kB + gitdb 4.0.10 pyhd8ed1ab_0 conda-forge/noarch 52kB - google-auth 2.14.0 pyh1a96a4e_0 conda-forge 96kB + google-auth 2.15.0 pyh1a96a4e_0 conda-forge/noarch 97kB - google-cloud-storage 2.6.0 pyh1a96a4e_0 conda-forge 75kB + google-cloud-storage 2.7.0 pyh1a96a4e_0 conda-forge/noarch 79kB - googleapis-common-protos 1.56.4 py310hff52083_1 conda-forge 126kB + googleapis-common-protos 1.57.0 pyhd8ed1ab_3 conda-forge/noarch 112kB - graphviz 6.0.1 h5abf519_0 conda-forge 3MB + graphviz 6.0.2 h99bc08f_0 conda-forge/linux-64 2MB - imagemagick 7.1.0_52 pl5321hc735599_0 conda-forge 3MB + imagemagick 7.1.0_53 pl5321hbe46f5a_0 conda-forge/linux-64 2MB - importlib-metadata 5.0.0 pyha770c72_1 conda-forge 24kB + importlib-metadata 5.1.0 pyha770c72_0 conda-forge/noarch 24kB - importlib_resources 5.10.0 pyhd8ed1ab_0 conda-forge 30kB + importlib_resources 5.10.1 pyhd8ed1ab_0 conda-forge/noarch 30kB - jax 0.3.24 pyhd8ed1ab_0 conda-forge 957kB + jax 0.3.25 pyhd8ed1ab_0 conda-forge/noarch 969kB - jaxlib 0.3.24 cpu_py310h39d22df_1 conda-forge 46MB + jaxlib 0.3.25 cpu_py310h7a287e5_1 conda-forge/linux-64 46MB - jupyter_core 4.11.2 py310hff52083_0 conda-forge 84kB + jupyter_core 5.1.0 py310hff52083_0 conda-forge/linux-64 86kB - libpng 1.6.38 h753d276_0 conda-forge 380kB + libpng 1.6.39 h753d276_0 conda-forge/linux-64 283kB - libprotobuf 3.21.9 h6239696_0 conda-forge 3MB + libprotobuf 3.21.10 h6239696_0 conda-forge/linux-64 2MB - libsqlite 3.39.4 h753d276_0 conda-forge 822kB + libsqlite 3.40.0 h753d276_0 conda-forge/linux-64 810kB - nextalign 2.8.0 h9ee0642_0 bioconda 2MB + nextalign 2.9.0 h9ee0642_0 bioconda/linux-64 2MB - nextclade 2.8.0 h9ee0642_0 bioconda 3MB + nextclade 2.9.0 h9ee0642_0 bioconda/linux-64 3MB - nextstrain-base 20221109T175138Z hb0f4dca_1_locked nextstrain 9kB + nextstrain-base 20221208T010417Z hb0f4dca_1_locked nextstrain/linux-64 9kB - numpy 1.23.4 py310h53a5b5f_1 conda-forge 7MB + numpy 1.23.5 py310h53a5b5f_0 conda-forge/linux-64 6MB - pandas 1.5.1 py310h769672d_1 conda-forge 14MB + pandas 1.5.2 py310h769672d_0 conda-forge/linux-64 11MB - pango 1.50.11 h382ae3d_0 conda-forge 467kB + pango 1.50.12 h382ae3d_0 conda-forge/linux-64 432kB - prettytable 3.4.1 pyhd8ed1ab_0 conda-forge 27kB + prettytable 3.5.0 pyhd8ed1ab_0 conda-forge/noarch 28kB - protobuf 4.21.9 py310hd8f1fbe_0 conda-forge 349kB + protobuf 4.21.10 py310hd8f1fbe_0 conda-forge/linux-64 316kB - python 3.10.6 ha86cf86_0_cpython conda-forge 30MB + python 3.10.8 h4a9ceb5_0_cpython conda-forge/linux-64 23MB - tbb 2021.6.0 h924138e_1 conda-forge 2MB + tbb 2021.7.0 h924138e_1 conda-forge/linux-64 2MB - traitlets 5.5.0 pyhd8ed1ab_0 conda-forge 87kB + traitlets 5.6.0 pyhd8ed1ab_0 conda-forge/noarch 91kB - tzdata 2022f h191b570_0 conda-forge 121kB + tzdata 2022g h191b570_0 conda-forge/noarch 108kB - urllib3 1.26.11 pyhd8ed1ab_0 conda-forge 104kB + urllib3 1.26.13 pyhd8ed1ab_0 conda-forge/noarch 111kB - wheel 0.38.3 pyhd8ed1ab_0 conda-forge 32kB + wheel 0.38.4 pyhd8ed1ab_0 conda-forge/noarch 33kB - zipp 3.10.0 pyhd8ed1ab_0 conda-forge 14kB + zipp 3.11.0 pyhd8ed1ab_0 conda-forge/noarch 16kB Summary: Install: 4 packages Change: 8 packages Upgrade: 39 packages Total download: 139MB